Healthy Cranberry Orange Protein Muffins (Easy, Kid-Friendly)

These cozy cranberry-orange protein muffins are kid-friendly, naturally sweetened, and perfect for breakfast or snacks. Made with Greek yogurt and whole grains.

Once I’ve finally had my fill of pumpkin spice (I know… gasp!), these cozy, citrusy, cranberry-studded muffins are the first thing I bake. They smell like the holidays, taste like a little winter sunshine, and make the perfect grab-and-go breakfast or snack during this very full season of school concerts, holiday parties, and sports practices.

As a dietitian and mom of three, I’m always thinking about how to get quick, nutrient-dense options into my kids that they’ll actually eat. These muffins check every box: they’re packed with protein thanks to Greek yogurt and eggs, they use whole wheat flour for fibre and staying power, and they’re just sweet enough without being overly sugary. Win-win.

And if you have a toddler who is suspicious of “little red things” in their muffins? Don’t worry — I’ve got swaps for that too.

Why You’ll Love These Cranberry-Orange Protein Muffins

These muffins are:

• Protein-rich (Greek yogurt + eggs = staying power!)
• Naturally sweetened with honey or maple syrup
• Made with whole wheat flour for fibre and slow-burning energy
• Kid-friendly — the perfect lunchbox or after-school snack
• Festive and cozy, without being too sweet
• Freezer-friendly for busy mornings

Pro tip as a fellow parent: make a double batch and stash half in the freezer. Future you will be so happy.

What Makes These Muffins Protein-Rich?

Protein is such an important piece for keeping kids full, energized, and ready to learn (or play hard!). These muffins have a surprising amount of it — about 5 grams of protein per muffin — which is pretty great for a homemade snack or quick breakfast.

Here’s where that protein comes from:

• Greek yogurt: Adds moisture and creaminess, plus 8–10 g of protein per cup.
• Eggs: Offer high-quality protein that helps balance the natural sweetness.
• Whole wheat flour: Adds extra plant-based protein and fibre.

Balanced, nourishing… and still fun and festive.

Ingredients You’ll Need

You likely have everything you need already in your pantry and fridge!

Dry Ingredients

• All-purpose flour
• Whole wheat flour
• Cinnamon
• Baking powder
• Baking soda
• Fine salt

Wet Ingredients

• Honey or maple syrup
• Grapeseed or other neutral oil
• Greek yogurt (plain or vanilla)
• Eggs
• Vanilla extract
• Fresh orange zest

Mix-ins

• Fresh or frozen cranberries

Kid-Friendly Swaps

If your child is wary of “chunks” or bright red berries:

• Use mini chocolate chips instead of cranberries
• Swap cranberries for blueberries
• Use vanilla Greek yogurt for a little extra sweetness

(You know your child best — small tweaks can help them feel confident trying something new.)

Allergy-Friendly Modifications

These muffins are very adaptable, which is such a relief when you’re juggling different preferences or dietary needs in a family.

Dairy-Free Version

Use a dairy-free yogurt alternative (coconut- or almond-based work well).

Egg-Free Version

Omit eggs and use 2 chia eggs:

• Mix 2 tbsp chia seeds with 6 tbsp water and let gel for a few minutes.

Vegan Version

Use both dairy-free yogurt and chia eggs as above.

How to Serve These Muffins

Of course, as a dietitian, I have to offer a few suggestions for you! A few easy, high-protein ideas:

• Pair with cheese sticks or yogurt for a balanced breakfast
• Add to lunchboxes with fruit and crunchy veggies
• Warm and spread with nut/seed butter
• Crumble over yogurt for a quick “muffin parfait”

Frequently Asked Questions

Try These Other Easy, Kid-Friendly Muffin Recipes

• Lemon Poppyseed Muffins that are high in protein
• Healthy chocolate zucchini blender muffins
• Lunchbox oatmeal muffins
• One-bowl whole grain chocolate chip muffins
• Flourless chocolate lentil protein muffins

Final Thoughts

If you’re looking for a cozy, festive, and protein-packed muffin that fuels your kids (and you!) through busy winter days, these cranberry orange muffins are such a great go-to. I hope they bring a little holiday brightness to your kitchen this season.

Cranberry Orange Protein Muffins

These cozy cranberry orange protein muffins are kid-friendly, lightly sweet, and perfect for breakfast or snacks. Made with Greek yogurt and whole grains.

5 from 1 vote

Print Recipe Pin Recipe

Prep Time 15 minutes mins

Cook Time 25 minutes mins

Total Time 40 minutes mins

Course Breakfast

Cuisine American

Servings 12 muffins

Ingredients

  

1x2x3x

• 1 cup all purpose flour
• 1 cup whole wheat flour
• 1 teaspoon cinnamon
• 1 teaspoon baking powder
• 1/2 teaspoon baking soda
• 1/2 teaspoon fine salt
• 1/2 cup honey or maple syrup
• 1/3 cup grapeseed or neutral-tasting oil
• 3/4 cup plain or vanilla Greek yogurt
• 2 large eggs
• 2 teaspoons vanilla extract
• 2 large oranges, zest about 5 teaspoons
• 1 1/2 cups fresh or frozen cranberries

Instructions

 

• Preheat the oven to 400°F/200°C and prepare a standard 12-cup muffin pan (I like using a silicone pan or silicone muffin cups but you can also grease a metal pan).
• In a a large mixing bowl, whisk together the dry ingredients (all purpose flour, whole wheat flour, cinnamon, baking powder, baking soda and salt). Set aside,
• To a medium mixing bowl, whisk together the wet ingredients (honey or syrup, oil, yogurt, eggs, vanilla and zest).
• Pour the wet ingredients into the dry ingredients and stir only until combined with no patches of flour. Fold in the cranberries.
• Divide the batter evenly in the muffin pan and bake for 23 to 25 minutes, until a toothpick comes out clean and the tops are golden.
• Cool in the pan on a cooling rack. If using a metal pan, run a knife around the sides of each muffin before removing them from the pan.

Notes

Dairy free version:

Use a non-dairy yogurt.

Egg free version:

See vegan version to use 2 chia eggs.

Vegan version:

Use dairy-free yogurt. Omit the eggs and use 2 chia eggs: combine 2 tablespoons chia seeds with 6 tablespoons of water and let sit for a  few minutes to gel. I like to do this before beginning the recipe.

Tried this recipe?Let us know how it was!

Sarah Remmer, RD

Sarah Remmer, RD, is a registered dietitian and mom of three, specializing in family and pediatric nutrition. She’s the founder of Centred Nutrition Collective and has nearly 20 years of experience helping families feel confident about feeding their kids.